HRGM_Genome_4152 - 2 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

c00011_HRGM_G.. (original name was: HRGM_Genome_4152_11) (Genus species)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	bacteriocin	37,887	48,168

c00017_HRGM_G.. (original name was: HRGM_Genome_4152_17) (Genus species)

Region	Type	From	To	Most similar known cluster		Similarity
Region 17.1	arylpolyene	1	40,482	flexirubin	Other	44%

Region	Type	From	To	Most similar known cluster	Similarity
Region 11.1	bacteriocin	37,887	48,168
Region 17.1	arylpolyene	1	40,482	flexirubin	Other	44%

No secondary metabolite regions were found in these records:: c00001_HRGM_G.. (original name was: HRGM_Genome_4152_1) (Genus species); c00002_HRGM_G.. (original name was: HRGM_Genome_4152_2) (Genus species); c00003_HRGM_G.. (original name was: HRGM_Genome_4152_3) (Genus species); c00004_HRGM_G.. (original name was: HRGM_Genome_4152_4) (Genus species); c00005_HRGM_G.. (original name was: HRGM_Genome_4152_5) (Genus species); c00006_HRGM_G.. (original name was: HRGM_Genome_4152_6) (Genus species); c00007_HRGM_G.. (original name was: HRGM_Genome_4152_7) (Genus species); c00008_HRGM_G.. (original name was: HRGM_Genome_4152_8) (Genus species); c00009_HRGM_G.. (original name was: HRGM_Genome_4152_9) (Genus species); c00010_HRGM_G.. (original name was: HRGM_Genome_4152_10) (Genus species); c00012_HRGM_G.. (original name was: HRGM_Genome_4152_12) (Genus species); c00013_HRGM_G.. (original name was: HRGM_Genome_4152_13) (Genus species); c00014_HRGM_G.. (original name was: HRGM_Genome_4152_14) (Genus species); c00015_HRGM_G.. (original name was: HRGM_Genome_4152_15) (Genus species); c00016_HRGM_G.. (original name was: HRGM_Genome_4152_16) (Genus species); c00018_HRGM_G.. (original name was: HRGM_Genome_4152_18) (Genus species); c00019_HRGM_G.. (original name was: HRGM_Genome_4152_19) (Genus species); c00020_HRGM_G.. (original name was: HRGM_Genome_4152_20) (Genus species); c00021_HRGM_G.. (original name was: HRGM_Genome_4152_21) (Genus species); c00022_HRGM_G.. (original name was: HRGM_Genome_4152_22) (Genus species); c00023_HRGM_G.. (original name was: HRGM_Genome_4152_23) (Genus species); c00024_HRGM_G.. (original name was: HRGM_Genome_4152_24) (Genus species); c00025_HRGM_G.. (original name was: HRGM_Genome_4152_25) (Genus species); c00026_HRGM_G.. (original name was: HRGM_Genome_4152_26) (Genus species); c00027_HRGM_G.. (original name was: HRGM_Genome_4152_27) (Genus species); c00028_HRGM_G.. (original name was: HRGM_Genome_4152_28) (Genus species); c00029_HRGM_G.. (original name was: HRGM_Genome_4152_29) (Genus species); c00030_HRGM_G.. (original name was: HRGM_Genome_4152_30) (Genus species); c00031_HRGM_G.. (original name was: HRGM_Genome_4152_31) (Genus species); c00032_HRGM_G.. (original name was: HRGM_Genome_4152_32) (Genus species); c00033_HRGM_G.. (original name was: HRGM_Genome_4152_33) (Genus species); c00034_HRGM_G.. (original name was: HRGM_Genome_4152_34) (Genus species); c00035_HRGM_G.. (original name was: HRGM_Genome_4152_35) (Genus species); c00036_HRGM_G.. (original name was: HRGM_Genome_4152_36) (Genus species); c00037_HRGM_G.. (original name was: HRGM_Genome_4152_37) (Genus species); c00038_HRGM_G.. (original name was: HRGM_Genome_4152_38) (Genus species); c00039_HRGM_G.. (original name was: HRGM_Genome_4152_39) (Genus species); c00040_HRGM_G.. (original name was: HRGM_Genome_4152_40) (Genus species); c00041_HRGM_G.. (original name was: HRGM_Genome_4152_41) (Genus species); c00042_HRGM_G.. (original name was: HRGM_Genome_4152_42) (Genus species); c00043_HRGM_G.. (original name was: HRGM_Genome_4152_43) (Genus species); c00044_HRGM_G.. (original name was: HRGM_Genome_4152_44) (Genus species); c00045_HRGM_G.. (original name was: HRGM_Genome_4152_45) (Genus species); c00046_HRGM_G.. (original name was: HRGM_Genome_4152_46) (Genus species); c00047_HRGM_G.. (original name was: HRGM_Genome_4152_47) (Genus species); c00048_HRGM_G.. (original name was: HRGM_Genome_4152_48) (Genus species); c00049_HRGM_G.. (original name was: HRGM_Genome_4152_49) (Genus species); c00050_HRGM_G.. (original name was: HRGM_Genome_4152_50) (Genus species); c00051_HRGM_G.. (original name was: HRGM_Genome_4152_51) (Genus species); c00052_HRGM_G.. (original name was: HRGM_Genome_4152_52) (Genus species); c00053_HRGM_G.. (original name was: HRGM_Genome_4152_53) (Genus species); c00054_HRGM_G.. (original name was: HRGM_Genome_4152_54) (Genus species); c00055_HRGM_G.. (original name was: HRGM_Genome_4152_55) (Genus species); c00056_HRGM_G.. (original name was: HRGM_Genome_4152_56) (Genus species); c00057_HRGM_G.. (original name was: HRGM_Genome_4152_57) (Genus species); c00058_HRGM_G.. (original name was: HRGM_Genome_4152_58) (Genus species); c00059_HRGM_G.. (original name was: HRGM_Genome_4152_59) (Genus species); c00060_HRGM_G.. (original name was: HRGM_Genome_4152_60) (Genus species); c00061_HRGM_G.. (original name was: HRGM_Genome_4152_61) (Genus species); c00062_HRGM_G.. (original name was: HRGM_Genome_4152_62) (Genus species); c00063_HRGM_G.. (original name was: HRGM_Genome_4152_63) (Genus species); c00064_HRGM_G.. (original name was: HRGM_Genome_4152_64) (Genus species); c00065_HRGM_G.. (original name was: HRGM_Genome_4152_65) (Genus species); c00066_HRGM_G.. (original name was: HRGM_Genome_4152_66) (Genus species); c00067_HRGM_G.. (original name was: HRGM_Genome_4152_67) (Genus species); c00068_HRGM_G.. (original name was: HRGM_Genome_4152_68) (Genus species); c00069_HRGM_G.. (original name was: HRGM_Genome_4152_69) (Genus species); c00070_HRGM_G.. (original name was: HRGM_Genome_4152_70) (Genus species); c00071_HRGM_G.. (original name was: HRGM_Genome_4152_71) (Genus species); c00072_HRGM_G.. (original name was: HRGM_Genome_4152_72) (Genus species); c00073_HRGM_G.. (original name was: HRGM_Genome_4152_73) (Genus species); c00074_HRGM_G.. (original name was: HRGM_Genome_4152_74) (Genus species); c00075_HRGM_G.. (original name was: HRGM_Genome_4152_75) (Genus species); c00076_HRGM_G.. (original name was: HRGM_Genome_4152_76) (Genus species); c00077_HRGM_G.. (original name was: HRGM_Genome_4152_77) (Genus species); c00078_HRGM_G.. (original name was: HRGM_Genome_4152_78) (Genus species); c00079_HRGM_G.. (original name was: HRGM_Genome_4152_79) (Genus species); c00080_HRGM_G.. (original name was: HRGM_Genome_4152_80) (Genus species)

Compact view

c00011_HRGM_G.. - Region 1 - bacteriocin

Download region GenBank file

Location: 37,887 - 48,168 nt. (total: 10,282 nt) Show pHMM detection rules used

bacteriocin: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03603 or TIGR03604 or TIGR03651 or TIGR03678 or TIGR03693 or TIGR03798 or TIGR03601 or TIGR03602 or TIGR03795 or TIGR03793 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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ClusterBlast

KnownClusterBlast

SubClusterBlast

Similar gene clusters

Similar known gene clusters

No matches found.

Similar subclusters

No matches found.

c00017_HRGM_G.. - Region 1 - arylpolyene

Download region GenBank file

Location: 1 - 40,482 nt. (total: 40,482 nt) Show pHMM detection rules used

Region on contig edge.

arylpolyene: (APE_KS1 or APE_KS2)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

ClusterBlast

KnownClusterBlast

SubClusterBlast

Similar gene clusters

Similar known gene clusters

Similar subclusters

No matches found.