HRGM_Genome_3853 - 3 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

c00005_HRGM_G.. (original name was: HRGM_Genome_3853_5) (Genus species)

Region	Type	From	To	Most similar known cluster		Similarity
Region 5.1	arylpolyene,ladderane,NRPS	16,072	55,530

c00051_HRGM_G.. (original name was: HRGM_Genome_3853_51) (Genus species)

Region	Type	From	To	Most similar known cluster		Similarity
Region 51.1	NRPS-like,bacteriocin	1	18,158

c00098_HRGM_G.. (original name was: HRGM_Genome_3853_98) (Genus species)

Region	Type	From	To	Most similar known cluster		Similarity
Region 98.1	betalactone	1	9,291

Region	Type	From	To	Similarity
Region 5.1	arylpolyene,ladderane,NRPS	16,072	55,530
Region 51.1	NRPS-like,bacteriocin	1	18,158
Region 98.1	betalactone	1	9,291

No secondary metabolite regions were found in these records:: c00001_HRGM_G.. (original name was: HRGM_Genome_3853_1) (Genus species); c00002_HRGM_G.. (original name was: HRGM_Genome_3853_2) (Genus species); c00003_HRGM_G.. (original name was: HRGM_Genome_3853_3) (Genus species); c00004_HRGM_G.. (original name was: HRGM_Genome_3853_4) (Genus species); c00006_HRGM_G.. (original name was: HRGM_Genome_3853_6) (Genus species); c00007_HRGM_G.. (original name was: HRGM_Genome_3853_7) (Genus species); c00008_HRGM_G.. (original name was: HRGM_Genome_3853_8) (Genus species); c00009_HRGM_G.. (original name was: HRGM_Genome_3853_9) (Genus species); c00010_HRGM_G.. (original name was: HRGM_Genome_3853_10) (Genus species); c00011_HRGM_G.. (original name was: HRGM_Genome_3853_11) (Genus species); c00012_HRGM_G.. (original name was: HRGM_Genome_3853_12) (Genus species); c00013_HRGM_G.. (original name was: HRGM_Genome_3853_13) (Genus species); c00014_HRGM_G.. (original name was: HRGM_Genome_3853_14) (Genus species); c00015_HRGM_G.. (original name was: HRGM_Genome_3853_15) (Genus species); c00016_HRGM_G.. (original name was: HRGM_Genome_3853_16) (Genus species); c00017_HRGM_G.. (original name was: HRGM_Genome_3853_17) (Genus species); c00018_HRGM_G.. (original name was: HRGM_Genome_3853_18) (Genus species); c00019_HRGM_G.. (original name was: HRGM_Genome_3853_19) (Genus species); c00020_HRGM_G.. (original name was: HRGM_Genome_3853_20) (Genus species); c00021_HRGM_G.. (original name was: HRGM_Genome_3853_21) (Genus species); c00022_HRGM_G.. (original name was: HRGM_Genome_3853_22) (Genus species); c00023_HRGM_G.. (original name was: HRGM_Genome_3853_23) (Genus species); c00024_HRGM_G.. (original name was: HRGM_Genome_3853_24) (Genus species); c00025_HRGM_G.. (original name was: HRGM_Genome_3853_25) (Genus species); c00026_HRGM_G.. (original name was: HRGM_Genome_3853_26) (Genus species); c00027_HRGM_G.. (original name was: HRGM_Genome_3853_27) (Genus species); c00028_HRGM_G.. (original name was: HRGM_Genome_3853_28) (Genus species); c00029_HRGM_G.. (original name was: HRGM_Genome_3853_29) (Genus species); c00030_HRGM_G.. (original name was: HRGM_Genome_3853_30) (Genus species); c00031_HRGM_G.. (original name was: HRGM_Genome_3853_31) (Genus species); c00032_HRGM_G.. (original name was: HRGM_Genome_3853_32) (Genus species); c00033_HRGM_G.. (original name was: HRGM_Genome_3853_33) (Genus species); c00034_HRGM_G.. (original name was: HRGM_Genome_3853_34) (Genus species); c00035_HRGM_G.. (original name was: HRGM_Genome_3853_35) (Genus species); c00036_HRGM_G.. (original name was: HRGM_Genome_3853_36) (Genus species); c00037_HRGM_G.. (original name was: HRGM_Genome_3853_37) (Genus species); c00038_HRGM_G.. (original name was: HRGM_Genome_3853_38) (Genus species); c00039_HRGM_G.. (original name was: HRGM_Genome_3853_39) (Genus species); c00040_HRGM_G.. (original name was: HRGM_Genome_3853_40) (Genus species); c00041_HRGM_G.. (original name was: HRGM_Genome_3853_41) (Genus species); c00042_HRGM_G.. (original name was: HRGM_Genome_3853_42) (Genus species); c00043_HRGM_G.. (original name was: HRGM_Genome_3853_43) (Genus species); c00044_HRGM_G.. (original name was: HRGM_Genome_3853_44) (Genus species); c00045_HRGM_G.. (original name was: HRGM_Genome_3853_45) (Genus species); c00046_HRGM_G.. (original name was: HRGM_Genome_3853_46) (Genus species); c00047_HRGM_G.. (original name was: HRGM_Genome_3853_47) (Genus species); c00048_HRGM_G.. (original name was: HRGM_Genome_3853_48) (Genus species); c00049_HRGM_G.. (original name was: HRGM_Genome_3853_49) (Genus species); c00050_HRGM_G.. (original name was: HRGM_Genome_3853_50) (Genus species); c00052_HRGM_G.. (original name was: HRGM_Genome_3853_52) (Genus species); c00053_HRGM_G.. (original name was: HRGM_Genome_3853_53) (Genus species); c00054_HRGM_G.. (original name was: HRGM_Genome_3853_54) (Genus species); c00055_HRGM_G.. (original name was: HRGM_Genome_3853_55) (Genus species); c00056_HRGM_G.. (original name was: HRGM_Genome_3853_56) (Genus species); c00057_HRGM_G.. (original name was: HRGM_Genome_3853_57) (Genus species); c00058_HRGM_G.. (original name was: HRGM_Genome_3853_58) (Genus species); c00059_HRGM_G.. (original name was: HRGM_Genome_3853_59) (Genus species); c00060_HRGM_G.. (original name was: HRGM_Genome_3853_60) (Genus species); c00061_HRGM_G.. (original name was: HRGM_Genome_3853_61) (Genus species); c00062_HRGM_G.. (original name was: HRGM_Genome_3853_62) (Genus species); c00063_HRGM_G.. (original name was: HRGM_Genome_3853_63) (Genus species); c00064_HRGM_G.. (original name was: HRGM_Genome_3853_64) (Genus species); c00065_HRGM_G.. (original name was: HRGM_Genome_3853_65) (Genus species); c00066_HRGM_G.. (original name was: HRGM_Genome_3853_66) (Genus species); c00067_HRGM_G.. (original name was: HRGM_Genome_3853_67) (Genus species); c00068_HRGM_G.. (original name was: HRGM_Genome_3853_68) (Genus species); c00069_HRGM_G.. (original name was: HRGM_Genome_3853_69) (Genus species); c00070_HRGM_G.. (original name was: HRGM_Genome_3853_70) (Genus species); c00071_HRGM_G.. (original name was: HRGM_Genome_3853_71) (Genus species); c00072_HRGM_G.. (original name was: HRGM_Genome_3853_72) (Genus species); c00073_HRGM_G.. (original name was: HRGM_Genome_3853_73) (Genus species); c00074_HRGM_G.. (original name was: HRGM_Genome_3853_74) (Genus species); c00075_HRGM_G.. (original name was: HRGM_Genome_3853_75) (Genus species); c00076_HRGM_G.. (original name was: HRGM_Genome_3853_76) (Genus species); c00077_HRGM_G.. (original name was: HRGM_Genome_3853_77) (Genus species); c00078_HRGM_G.. (original name was: HRGM_Genome_3853_78) (Genus species); c00079_HRGM_G.. (original name was: HRGM_Genome_3853_79) (Genus species); c00080_HRGM_G.. (original name was: HRGM_Genome_3853_80) (Genus species); c00081_HRGM_G.. (original name was: HRGM_Genome_3853_81) (Genus species); c00082_HRGM_G.. (original name was: HRGM_Genome_3853_82) (Genus species); c00083_HRGM_G.. (original name was: HRGM_Genome_3853_83) (Genus species); c00084_HRGM_G.. (original name was: HRGM_Genome_3853_84) (Genus species); c00085_HRGM_G.. (original name was: HRGM_Genome_3853_85) (Genus species); c00086_HRGM_G.. (original name was: HRGM_Genome_3853_86) (Genus species); c00087_HRGM_G.. (original name was: HRGM_Genome_3853_87) (Genus species); c00088_HRGM_G.. (original name was: HRGM_Genome_3853_88) (Genus species); c00089_HRGM_G.. (original name was: HRGM_Genome_3853_89) (Genus species); c00090_HRGM_G.. (original name was: HRGM_Genome_3853_90) (Genus species); c00091_HRGM_G.. (original name was: HRGM_Genome_3853_91) (Genus species); c00092_HRGM_G.. (original name was: HRGM_Genome_3853_92) (Genus species); c00093_HRGM_G.. (original name was: HRGM_Genome_3853_93) (Genus species); c00094_HRGM_G.. (original name was: HRGM_Genome_3853_94) (Genus species); c00095_HRGM_G.. (original name was: HRGM_Genome_3853_95) (Genus species); c00096_HRGM_G.. (original name was: HRGM_Genome_3853_96) (Genus species); c00097_HRGM_G.. (original name was: HRGM_Genome_3853_97) (Genus species); c00099_HRGM_G.. (original name was: HRGM_Genome_3853_99) (Genus species); c00100_HRGM_G.. (original name was: HRGM_Genome_3853_100) (Genus species); c00101_HRGM_G.. (original name was: HRGM_Genome_3853_101) (Genus species); c00102_HRGM_G.. (original name was: HRGM_Genome_3853_102) (Genus species); c00103_HRGM_G.. (original name was: HRGM_Genome_3853_103) (Genus species); c00104_HRGM_G.. (original name was: HRGM_Genome_3853_104) (Genus species); c00105_HRGM_G.. (original name was: HRGM_Genome_3853_105) (Genus species); c00106_HRGM_G.. (original name was: HRGM_Genome_3853_106) (Genus species); c00107_HRGM_G.. (original name was: HRGM_Genome_3853_107) (Genus species); c00108_HRGM_G.. (original name was: HRGM_Genome_3853_108) (Genus species); c00109_HRGM_G.. (original name was: HRGM_Genome_3853_109) (Genus species); c00110_HRGM_G.. (original name was: HRGM_Genome_3853_110) (Genus species); c00111_HRGM_G.. (original name was: HRGM_Genome_3853_111) (Genus species); c00112_HRGM_G.. (original name was: HRGM_Genome_3853_112) (Genus species); c00113_HRGM_G.. (original name was: HRGM_Genome_3853_113) (Genus species); c00114_HRGM_G.. (original name was: HRGM_Genome_3853_114) (Genus species); c00115_HRGM_G.. (original name was: HRGM_Genome_3853_115) (Genus species); c00116_HRGM_G.. (original name was: HRGM_Genome_3853_116) (Genus species); c00117_HRGM_G.. (original name was: HRGM_Genome_3853_117) (Genus species); c00118_HRGM_G.. (original name was: HRGM_Genome_3853_118) (Genus species); c00119_HRGM_G.. (original name was: HRGM_Genome_3853_119) (Genus species); c00120_HRGM_G.. (original name was: HRGM_Genome_3853_120) (Genus species); c00121_HRGM_G.. (original name was: HRGM_Genome_3853_121) (Genus species); c00122_HRGM_G.. (original name was: HRGM_Genome_3853_122) (Genus species); c00123_HRGM_G.. (original name was: HRGM_Genome_3853_123) (Genus species); c00124_HRGM_G.. (original name was: HRGM_Genome_3853_124) (Genus species); c00125_HRGM_G.. (original name was: HRGM_Genome_3853_125) (Genus species); c00126_HRGM_G.. (original name was: HRGM_Genome_3853_126) (Genus species); c00127_HRGM_G.. (original name was: HRGM_Genome_3853_127) (Genus species); c00128_HRGM_G.. (original name was: HRGM_Genome_3853_128) (Genus species); c00129_HRGM_G.. (original name was: HRGM_Genome_3853_129) (Genus species); c00130_HRGM_G.. (original name was: HRGM_Genome_3853_130) (Genus species); c00131_HRGM_G.. (original name was: HRGM_Genome_3853_131) (Genus species); c00132_HRGM_G.. (original name was: HRGM_Genome_3853_132) (Genus species); c00133_HRGM_G.. (original name was: HRGM_Genome_3853_133) (Genus species); c00134_HRGM_G.. (original name was: HRGM_Genome_3853_134) (Genus species); c00135_HRGM_G.. (original name was: HRGM_Genome_3853_135) (Genus species); c00136_HRGM_G.. (original name was: HRGM_Genome_3853_136) (Genus species); c00137_HRGM_G.. (original name was: HRGM_Genome_3853_137) (Genus species); c00138_HRGM_G.. (original name was: HRGM_Genome_3853_138) (Genus species); c00139_HRGM_G.. (original name was: HRGM_Genome_3853_139) (Genus species); c00140_HRGM_G.. (original name was: HRGM_Genome_3853_140) (Genus species); c00141_HRGM_G.. (original name was: HRGM_Genome_3853_141) (Genus species); c00142_HRGM_G.. (original name was: HRGM_Genome_3853_142) (Genus species); c00143_HRGM_G.. (original name was: HRGM_Genome_3853_143) (Genus species); c00144_HRGM_G.. (original name was: HRGM_Genome_3853_144) (Genus species); c00145_HRGM_G.. (original name was: HRGM_Genome_3853_145) (Genus species); c00146_HRGM_G.. (original name was: HRGM_Genome_3853_146) (Genus species); c00147_HRGM_G.. (original name was: HRGM_Genome_3853_147) (Genus species); c00148_HRGM_G.. (original name was: HRGM_Genome_3853_148) (Genus species); c00149_HRGM_G.. (original name was: HRGM_Genome_3853_149) (Genus species); c00150_HRGM_G.. (original name was: HRGM_Genome_3853_150) (Genus species); c00151_HRGM_G.. (original name was: HRGM_Genome_3853_151) (Genus species); c00152_HRGM_G.. (original name was: HRGM_Genome_3853_152) (Genus species); c00153_HRGM_G.. (original name was: HRGM_Genome_3853_153) (Genus species); c00154_HRGM_G.. (original name was: HRGM_Genome_3853_154) (Genus species); c00155_HRGM_G.. (original name was: HRGM_Genome_3853_155) (Genus species); c00156_HRGM_G.. (original name was: HRGM_Genome_3853_156) (Genus species); c00157_HRGM_G.. (original name was: HRGM_Genome_3853_157) (Genus species); c00158_HRGM_G.. (original name was: HRGM_Genome_3853_158) (Genus species); c00159_HRGM_G.. (original name was: HRGM_Genome_3853_159) (Genus species); c00160_HRGM_G.. (original name was: HRGM_Genome_3853_160) (Genus species); c00161_HRGM_G.. (original name was: HRGM_Genome_3853_161) (Genus species); c00162_HRGM_G.. (original name was: HRGM_Genome_3853_162) (Genus species); c00163_HRGM_G.. (original name was: HRGM_Genome_3853_163) (Genus species); c00164_HRGM_G.. (original name was: HRGM_Genome_3853_164) (Genus species); c00165_HRGM_G.. (original name was: HRGM_Genome_3853_165) (Genus species); c00166_HRGM_G.. (original name was: HRGM_Genome_3853_166) (Genus species); c00167_HRGM_G.. (original name was: HRGM_Genome_3853_167) (Genus species); c00168_HRGM_G.. (original name was: HRGM_Genome_3853_168) (Genus species); c00169_HRGM_G.. (original name was: HRGM_Genome_3853_169) (Genus species); c00170_HRGM_G.. (original name was: HRGM_Genome_3853_170) (Genus species); c00171_HRGM_G.. (original name was: HRGM_Genome_3853_171) (Genus species); c00172_HRGM_G.. (original name was: HRGM_Genome_3853_172) (Genus species); c00173_HRGM_G.. (original name was: HRGM_Genome_3853_173) (Genus species); c00174_HRGM_G.. (original name was: HRGM_Genome_3853_174) (Genus species); c00175_HRGM_G.. (original name was: HRGM_Genome_3853_175) (Genus species); c00176_HRGM_G.. (original name was: HRGM_Genome_3853_176) (Genus species); c00177_HRGM_G.. (original name was: HRGM_Genome_3853_177) (Genus species); c00178_HRGM_G.. (original name was: HRGM_Genome_3853_178) (Genus species); c00179_HRGM_G.. (original name was: HRGM_Genome_3853_179) (Genus species); c00180_HRGM_G.. (original name was: HRGM_Genome_3853_180) (Genus species); c00181_HRGM_G.. (original name was: HRGM_Genome_3853_181) (Genus species); c00182_HRGM_G.. (original name was: HRGM_Genome_3853_182) (Genus species); c00183_HRGM_G.. (original name was: HRGM_Genome_3853_183) (Genus species); c00184_HRGM_G.. (original name was: HRGM_Genome_3853_184) (Genus species); c00185_HRGM_G.. (original name was: HRGM_Genome_3853_185) (Genus species); c00186_HRGM_G.. (original name was: HRGM_Genome_3853_186) (Genus species); c00187_HRGM_G.. (original name was: HRGM_Genome_3853_187) (Genus species); c00188_HRGM_G.. (original name was: HRGM_Genome_3853_188) (Genus species); c00189_HRGM_G.. (original name was: HRGM_Genome_3853_189) (Genus species); c00190_HRGM_G.. (original name was: HRGM_Genome_3853_190) (Genus species); c00191_HRGM_G.. (original name was: HRGM_Genome_3853_191) (Genus species); c00192_HRGM_G.. (original name was: HRGM_Genome_3853_192) (Genus species); c00193_HRGM_G.. (original name was: HRGM_Genome_3853_193) (Genus species); c00194_HRGM_G.. (original name was: HRGM_Genome_3853_194) (Genus species); c00195_HRGM_G.. (original name was: HRGM_Genome_3853_195) (Genus species); c00196_HRGM_G.. (original name was: HRGM_Genome_3853_196) (Genus species); c00197_HRGM_G.. (original name was: HRGM_Genome_3853_197) (Genus species); c00198_HRGM_G.. (original name was: HRGM_Genome_3853_198) (Genus species); c00199_HRGM_G.. (original name was: HRGM_Genome_3853_199) (Genus species); c00200_HRGM_G.. (original name was: HRGM_Genome_3853_200) (Genus species); c00201_HRGM_G.. (original name was: HRGM_Genome_3853_201) (Genus species); c00202_HRGM_G.. (original name was: HRGM_Genome_3853_202) (Genus species); c00203_HRGM_G.. (original name was: HRGM_Genome_3853_203) (Genus species); c00204_HRGM_G.. (original name was: HRGM_Genome_3853_204) (Genus species); c00205_HRGM_G.. (original name was: HRGM_Genome_3853_205) (Genus species); c00206_HRGM_G.. (original name was: HRGM_Genome_3853_206) (Genus species); c00207_HRGM_G.. (original name was: HRGM_Genome_3853_207) (Genus species); c00208_HRGM_G.. (original name was: HRGM_Genome_3853_208) (Genus species); c00209_HRGM_G.. (original name was: HRGM_Genome_3853_209) (Genus species); c00210_HRGM_G.. (original name was: HRGM_Genome_3853_210) (Genus species); c00211_HRGM_G.. (original name was: HRGM_Genome_3853_211) (Genus species); c00212_HRGM_G.. (original name was: HRGM_Genome_3853_212) (Genus species); c00213_HRGM_G.. (original name was: HRGM_Genome_3853_213) (Genus species); c00214_HRGM_G.. (original name was: HRGM_Genome_3853_214) (Genus species); c00215_HRGM_G.. (original name was: HRGM_Genome_3853_215) (Genus species); c00216_HRGM_G.. (original name was: HRGM_Genome_3853_216) (Genus species); c00217_HRGM_G.. (original name was: HRGM_Genome_3853_217) (Genus species); c00218_HRGM_G.. (original name was: HRGM_Genome_3853_218) (Genus species); c00219_HRGM_G.. (original name was: HRGM_Genome_3853_219) (Genus species); c00220_HRGM_G.. (original name was: HRGM_Genome_3853_220) (Genus species); c00221_HRGM_G.. (original name was: HRGM_Genome_3853_221) (Genus species); c00222_HRGM_G.. (original name was: HRGM_Genome_3853_222) (Genus species); c00223_HRGM_G.. (original name was: HRGM_Genome_3853_223) (Genus species); c00224_HRGM_G.. (original name was: HRGM_Genome_3853_224) (Genus species); c00225_HRGM_G.. (original name was: HRGM_Genome_3853_225) (Genus species); c00226_HRGM_G.. (original name was: HRGM_Genome_3853_226) (Genus species); c00227_HRGM_G.. (original name was: HRGM_Genome_3853_227) (Genus species); c00228_HRGM_G.. (original name was: HRGM_Genome_3853_228) (Genus species); c00229_HRGM_G.. (original name was: HRGM_Genome_3853_229) (Genus species); c00230_HRGM_G.. (original name was: HRGM_Genome_3853_230) (Genus species); c00231_HRGM_G.. (original name was: HRGM_Genome_3853_231) (Genus species); c00232_HRGM_G.. (original name was: HRGM_Genome_3853_232) (Genus species); c00233_HRGM_G.. (original name was: HRGM_Genome_3853_233) (Genus species); c00234_HRGM_G.. (original name was: HRGM_Genome_3853_234) (Genus species); c00235_HRGM_G.. (original name was: HRGM_Genome_3853_235) (Genus species); c00236_HRGM_G.. (original name was: HRGM_Genome_3853_236) (Genus species); c00237_HRGM_G.. (original name was: HRGM_Genome_3853_237) (Genus species); c00238_HRGM_G.. (original name was: HRGM_Genome_3853_238) (Genus species); c00239_HRGM_G.. (original name was: HRGM_Genome_3853_239) (Genus species); c00240_HRGM_G.. (original name was: HRGM_Genome_3853_240) (Genus species); c00241_HRGM_G.. (original name was: HRGM_Genome_3853_241) (Genus species); c00242_HRGM_G.. (original name was: HRGM_Genome_3853_242) (Genus species); c00243_HRGM_G.. (original name was: HRGM_Genome_3853_243) (Genus species); c00244_HRGM_G.. (original name was: HRGM_Genome_3853_244) (Genus species); c00245_HRGM_G.. (original name was: HRGM_Genome_3853_245) (Genus species); c00246_HRGM_G.. (original name was: HRGM_Genome_3853_246) (Genus species); c00247_HRGM_G.. (original name was: HRGM_Genome_3853_247) (Genus species); c00248_HRGM_G.. (original name was: HRGM_Genome_3853_248) (Genus species); c00249_HRGM_G.. (original name was: HRGM_Genome_3853_249) (Genus species); c00250_HRGM_G.. (original name was: HRGM_Genome_3853_250) (Genus species); c00251_HRGM_G.. (original name was: HRGM_Genome_3853_251) (Genus species); c00252_HRGM_G.. (original name was: HRGM_Genome_3853_252) (Genus species); c00253_HRGM_G.. (original name was: HRGM_Genome_3853_253) (Genus species); c00254_HRGM_G.. (original name was: HRGM_Genome_3853_254) (Genus species); c00255_HRGM_G.. (original name was: HRGM_Genome_3853_255) (Genus species); c00256_HRGM_G.. (original name was: HRGM_Genome_3853_256) (Genus species); c00257_HRGM_G.. (original name was: HRGM_Genome_3853_257) (Genus species); c00258_HRGM_G.. (original name was: HRGM_Genome_3853_258) (Genus species); c00259_HRGM_G.. (original name was: HRGM_Genome_3853_259) (Genus species); c00260_HRGM_G.. (original name was: HRGM_Genome_3853_260) (Genus species); c00261_HRGM_G.. (original name was: HRGM_Genome_3853_261) (Genus species)

Compact view

c00005_HRGM_G.. - Region 1 - NRPS,arylpolyene,ladderane

Download region GenBank file

Location: 16,072 - 55,530 nt. (total: 39,459 nt) Show pHMM detection rules used

Region on contig edge.

arylpolyene: (APE_KS1 or APE_KS2)
ladderane: ladderane
NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

NRPS/PKS domains

ClusterBlast

KnownClusterBlast

SubClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Similar known gene clusters

No matches found.

Similar subclusters

No matches found.

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 16071 - 55530:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (D-asn)

Direct lookup in NORINE database: strict or relaxed

For candidate cluster 3, location 22108 - 55530:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (D-asn)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

HRGM_Genome_3853_CDS_00236

PKS_AT (14..287): mal

ATSignature: (unknown)

No matches above 50%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 19.7
Methylmalonyl-CoA: 11.3
trans-1,2-CPDA: 0.0
inactive: 0.0
fatty_acid: 0.0
Propionyl-CoA: 0.0
Methoxymalonyl-CoA: 0.0
Isobutyryl-CoA: 0.0
Ethylmalonyl-CoA: 0.0
CHC-CoA: 0.0
Benzoyl-CoA: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0
2-Methylbutyryl-CoA: 0.0

HRGM_Genome_3853_CDS_00245

Search NORINE for peptide: strict or relaxed

AMP-binding (460..875): asn

NRPSPredictor2: asn

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: asp, asn
Single AA prediction:: asn

Stachelhaus prediction details:

Stachelhaus sequence:: DFTKIGEVGK
Nearest Stachelhaus code:: asn
Stachelhaus code match:: 100% (strong)

c00051_HRGM_G.. - Region 1 - NRPS-like,bacteriocin

Download region GenBank file

Location: 1 - 18,158 nt. (total: 18,158 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))
bacteriocin: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03603 or TIGR03604 or TIGR03651 or TIGR03678 or TIGR03693 or TIGR03798 or TIGR03601 or TIGR03602 or TIGR03795 or TIGR03793 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

NRPS/PKS domains

ClusterBlast

KnownClusterBlast

SubClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Similar known gene clusters

No matches found.

Similar subclusters

No matches found.

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 18158:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (tyr)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

HRGM_Genome_3853_CDS_01441

Search NORINE for peptide: strict or relaxed

AMP-binding (36..432): tyr

NRPSPredictor2: tyr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: phe, trp, phg, tyr, bht
Small clusters prediction:: tyr, bht
Single AA prediction:: tyr

Stachelhaus prediction details:

Stachelhaus sequence:: DAaSIGeiiK
Nearest Stachelhaus code:: lys
Stachelhaus code match:: 60% (weak)

HRGM_Genome_3853_CDS_01453

PKS_AT (6..291): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 58.3%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 47.5
Methoxymalonyl-CoA: 26.3
Methylmalonyl-CoA: 20.3
inactive: 17.9
Benzoyl-CoA: 11.8
Acetyl-CoA: 10.5
trans-1,2-CPDA: 0.0
fatty_acid: 0.0
Propionyl-CoA: 0.0
Isobutyryl-CoA: 0.0
Ethylmalonyl-CoA: 0.0
CHC-CoA: 0.0
3-Methylbutyryl-CoA: 0.0
2-Methylbutyryl-CoA: 0.0

c00098_HRGM_G.. - Region 1 - betalactone

Download region GenBank file

Location: 1 - 9,291 nt. (total: 9,291 nt) Show pHMM detection rules used

Region on contig edge.

betalactone: (HMGL-like and AMP-binding)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

ClusterBlast

KnownClusterBlast

SubClusterBlast

Similar gene clusters

Similar known gene clusters

No matches found.

Similar subclusters

No matches found.