HRGM_Genome_3328 - 4 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

c00007_HRGM_G.. (original name was: HRGM_Genome_3328_7) (Genus species)

Region	Type	From	To	Most similar known cluster		Similarity
Region 7.1	bacteriocin	33,043	43,438

c00008_HRGM_G.. (original name was: HRGM_Genome_3328_8) (Genus species)

Region	Type	From	To	Most similar known cluster		Similarity
Region 8.1	sactipeptide	20,105	40,251

c00020_HRGM_G.. (original name was: HRGM_Genome_3328_20) (Genus species)

Region	Type	From	To	Most similar known cluster		Similarity
Region 20.1	bacteriocin	33,536	39,372

c00035_HRGM_G.. (original name was: HRGM_Genome_3328_35) (Genus species)

Region	Type	From	To	Most similar known cluster		Similarity
Region 35.1	betalactone	1	17,626

Region	Type	From	To	Similarity
Region 7.1	bacteriocin	33,043	43,438
Region 8.1	sactipeptide	20,105	40,251
Region 20.1	bacteriocin	33,536	39,372
Region 35.1	betalactone	1	17,626

No secondary metabolite regions were found in these records:: c00001_HRGM_G.. (original name was: HRGM_Genome_3328_1) (Genus species); c00002_HRGM_G.. (original name was: HRGM_Genome_3328_2) (Genus species); c00003_HRGM_G.. (original name was: HRGM_Genome_3328_3) (Genus species); c00004_HRGM_G.. (original name was: HRGM_Genome_3328_4) (Genus species); c00005_HRGM_G.. (original name was: HRGM_Genome_3328_5) (Genus species); c00006_HRGM_G.. (original name was: HRGM_Genome_3328_6) (Genus species); c00009_HRGM_G.. (original name was: HRGM_Genome_3328_9) (Genus species); c00010_HRGM_G.. (original name was: HRGM_Genome_3328_10) (Genus species); c00011_HRGM_G.. (original name was: HRGM_Genome_3328_11) (Genus species); c00012_HRGM_G.. (original name was: HRGM_Genome_3328_12) (Genus species); c00013_HRGM_G.. (original name was: HRGM_Genome_3328_13) (Genus species); c00014_HRGM_G.. (original name was: HRGM_Genome_3328_14) (Genus species); c00015_HRGM_G.. (original name was: HRGM_Genome_3328_15) (Genus species); c00016_HRGM_G.. (original name was: HRGM_Genome_3328_16) (Genus species); c00017_HRGM_G.. (original name was: HRGM_Genome_3328_17) (Genus species); c00018_HRGM_G.. (original name was: HRGM_Genome_3328_18) (Genus species); c00019_HRGM_G.. (original name was: HRGM_Genome_3328_19) (Genus species); c00021_HRGM_G.. (original name was: HRGM_Genome_3328_21) (Genus species); c00022_HRGM_G.. (original name was: HRGM_Genome_3328_22) (Genus species); c00023_HRGM_G.. (original name was: HRGM_Genome_3328_23) (Genus species); c00024_HRGM_G.. (original name was: HRGM_Genome_3328_24) (Genus species); c00025_HRGM_G.. (original name was: HRGM_Genome_3328_25) (Genus species); c00026_HRGM_G.. (original name was: HRGM_Genome_3328_26) (Genus species); c00027_HRGM_G.. (original name was: HRGM_Genome_3328_27) (Genus species); c00028_HRGM_G.. (original name was: HRGM_Genome_3328_28) (Genus species); c00029_HRGM_G.. (original name was: HRGM_Genome_3328_29) (Genus species); c00030_HRGM_G.. (original name was: HRGM_Genome_3328_30) (Genus species); c00031_HRGM_G.. (original name was: HRGM_Genome_3328_31) (Genus species); c00032_HRGM_G.. (original name was: HRGM_Genome_3328_32) (Genus species); c00033_HRGM_G.. (original name was: HRGM_Genome_3328_33) (Genus species); c00034_HRGM_G.. (original name was: HRGM_Genome_3328_34) (Genus species); c00036_HRGM_G.. (original name was: HRGM_Genome_3328_36) (Genus species); c00037_HRGM_G.. (original name was: HRGM_Genome_3328_37) (Genus species); c00038_HRGM_G.. (original name was: HRGM_Genome_3328_38) (Genus species); c00039_HRGM_G.. (original name was: HRGM_Genome_3328_39) (Genus species); c00040_HRGM_G.. (original name was: HRGM_Genome_3328_40) (Genus species); c00041_HRGM_G.. (original name was: HRGM_Genome_3328_41) (Genus species); c00042_HRGM_G.. (original name was: HRGM_Genome_3328_42) (Genus species); c00043_HRGM_G.. (original name was: HRGM_Genome_3328_43) (Genus species); c00044_HRGM_G.. (original name was: HRGM_Genome_3328_44) (Genus species); c00045_HRGM_G.. (original name was: HRGM_Genome_3328_45) (Genus species); c00046_HRGM_G.. (original name was: HRGM_Genome_3328_46) (Genus species); c00047_HRGM_G.. (original name was: HRGM_Genome_3328_47) (Genus species); c00048_HRGM_G.. (original name was: HRGM_Genome_3328_48) (Genus species); c00049_HRGM_G.. (original name was: HRGM_Genome_3328_49) (Genus species); c00050_HRGM_G.. (original name was: HRGM_Genome_3328_50) (Genus species); c00051_HRGM_G.. (original name was: HRGM_Genome_3328_51) (Genus species); c00052_HRGM_G.. (original name was: HRGM_Genome_3328_52) (Genus species); c00053_HRGM_G.. (original name was: HRGM_Genome_3328_53) (Genus species); c00054_HRGM_G.. (original name was: HRGM_Genome_3328_54) (Genus species); c00055_HRGM_G.. (original name was: HRGM_Genome_3328_55) (Genus species); c00056_HRGM_G.. (original name was: HRGM_Genome_3328_56) (Genus species); c00057_HRGM_G.. (original name was: HRGM_Genome_3328_57) (Genus species); c00058_HRGM_G.. (original name was: HRGM_Genome_3328_58) (Genus species); c00059_HRGM_G.. (original name was: HRGM_Genome_3328_59) (Genus species); c00060_HRGM_G.. (original name was: HRGM_Genome_3328_60) (Genus species); c00061_HRGM_G.. (original name was: HRGM_Genome_3328_61) (Genus species); c00062_HRGM_G.. (original name was: HRGM_Genome_3328_62) (Genus species); c00063_HRGM_G.. (original name was: HRGM_Genome_3328_63) (Genus species); c00064_HRGM_G.. (original name was: HRGM_Genome_3328_64) (Genus species); c00065_HRGM_G.. (original name was: HRGM_Genome_3328_65) (Genus species); c00066_HRGM_G.. (original name was: HRGM_Genome_3328_66) (Genus species); c00067_HRGM_G.. (original name was: HRGM_Genome_3328_67) (Genus species); c00068_HRGM_G.. (original name was: HRGM_Genome_3328_68) (Genus species); c00069_HRGM_G.. (original name was: HRGM_Genome_3328_69) (Genus species); c00070_HRGM_G.. (original name was: HRGM_Genome_3328_70) (Genus species); c00071_HRGM_G.. (original name was: HRGM_Genome_3328_71) (Genus species); c00072_HRGM_G.. (original name was: HRGM_Genome_3328_72) (Genus species); c00073_HRGM_G.. (original name was: HRGM_Genome_3328_73) (Genus species); c00074_HRGM_G.. (original name was: HRGM_Genome_3328_74) (Genus species); c00075_HRGM_G.. (original name was: HRGM_Genome_3328_75) (Genus species); c00076_HRGM_G.. (original name was: HRGM_Genome_3328_76) (Genus species); c00077_HRGM_G.. (original name was: HRGM_Genome_3328_77) (Genus species); c00078_HRGM_G.. (original name was: HRGM_Genome_3328_78) (Genus species); c00079_HRGM_G.. (original name was: HRGM_Genome_3328_79) (Genus species); c00080_HRGM_G.. (original name was: HRGM_Genome_3328_80) (Genus species); c00081_HRGM_G.. (original name was: HRGM_Genome_3328_81) (Genus species); c00082_HRGM_G.. (original name was: HRGM_Genome_3328_82) (Genus species); c00083_HRGM_G.. (original name was: HRGM_Genome_3328_83) (Genus species); c00084_HRGM_G.. (original name was: HRGM_Genome_3328_84) (Genus species); c00085_HRGM_G.. (original name was: HRGM_Genome_3328_85) (Genus species); c00086_HRGM_G.. (original name was: HRGM_Genome_3328_86) (Genus species); c00087_HRGM_G.. (original name was: HRGM_Genome_3328_87) (Genus species); c00088_HRGM_G.. (original name was: HRGM_Genome_3328_88) (Genus species)

Compact view

c00007_HRGM_G.. - Region 1 - bacteriocin

Download region GenBank file

Location: 33,043 - 43,438 nt. (total: 10,396 nt) Show pHMM detection rules used

bacteriocin: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03603 or TIGR03604 or TIGR03651 or TIGR03678 or TIGR03693 or TIGR03798 or TIGR03601 or TIGR03602 or TIGR03795 or TIGR03793 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

ClusterBlast

KnownClusterBlast

SubClusterBlast

Similar gene clusters

Similar known gene clusters

No matches found.

Similar subclusters

No matches found.

c00008_HRGM_G.. - Region 1 - sactipeptide

Download region GenBank file

Location: 20,105 - 40,251 nt. (total: 20,147 nt) Show pHMM detection rules used

sactipeptide: (subtilosin or thuricin or TIGR04404 or TIGR03973)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

ClusterBlast

KnownClusterBlast

SubClusterBlast

Sactipeptides

Similar gene clusters

Similar known gene clusters

No matches found.

Similar subclusters

No matches found.

Sactipeptide predictions

Sactipeptides - No core peptides found.

Sactipeptides

Core peptide predictions

No core peptides found.

c00020_HRGM_G.. - Region 1 - bacteriocin

Download region GenBank file

Location: 33,536 - 39,372 nt. (total: 5,837 nt) Show pHMM detection rules used

Region on contig edge.

bacteriocin: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03603 or TIGR03604 or TIGR03651 or TIGR03678 or TIGR03693 or TIGR03798 or TIGR03601 or TIGR03602 or TIGR03795 or TIGR03793 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

ClusterBlast

KnownClusterBlast

SubClusterBlast

Similar gene clusters

Similar known gene clusters

No matches found.

Similar subclusters

No matches found.

c00035_HRGM_G.. - Region 1 - betalactone

Download region GenBank file

Location: 1 - 17,626 nt. (total: 17,626 nt) Show pHMM detection rules used

Region on contig edge.

betalactone: (HMGL-like and AMP-binding)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

ClusterBlast

KnownClusterBlast

SubClusterBlast

Similar gene clusters

Similar known gene clusters

No matches found.

Similar subclusters

No matches found.