HRGM_Genome_3082 - 3 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

c00001_HRGM_G.. (original name was: HRGM_Genome_3082_1) (Genus species)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	bacteriocin	78,975	89,313

c00004_HRGM_G.. (original name was: HRGM_Genome_3082_4) (Genus species)

Region	Type	From	To	Most similar known cluster		Similarity
Region 4.1	bacteriocin	78,388	88,723

c00030_HRGM_G.. (original name was: HRGM_Genome_3082_30) (Genus species)

Region	Type	From	To	Most similar known cluster		Similarity
Region 30.1	bacteriocin	1	5,942

Region	Type	From	To	Similarity
Region 1.1	bacteriocin	78,975	89,313
Region 4.1	bacteriocin	78,388	88,723
Region 30.1	bacteriocin	1	5,942

No secondary metabolite regions were found in these records:: c00002_HRGM_G.. (original name was: HRGM_Genome_3082_2) (Genus species); c00003_HRGM_G.. (original name was: HRGM_Genome_3082_3) (Genus species); c00005_HRGM_G.. (original name was: HRGM_Genome_3082_5) (Genus species); c00006_HRGM_G.. (original name was: HRGM_Genome_3082_6) (Genus species); c00007_HRGM_G.. (original name was: HRGM_Genome_3082_7) (Genus species); c00008_HRGM_G.. (original name was: HRGM_Genome_3082_8) (Genus species); c00009_HRGM_G.. (original name was: HRGM_Genome_3082_9) (Genus species); c00010_HRGM_G.. (original name was: HRGM_Genome_3082_10) (Genus species); c00011_HRGM_G.. (original name was: HRGM_Genome_3082_11) (Genus species); c00012_HRGM_G.. (original name was: HRGM_Genome_3082_12) (Genus species); c00013_HRGM_G.. (original name was: HRGM_Genome_3082_13) (Genus species); c00014_HRGM_G.. (original name was: HRGM_Genome_3082_14) (Genus species); c00015_HRGM_G.. (original name was: HRGM_Genome_3082_15) (Genus species); c00016_HRGM_G.. (original name was: HRGM_Genome_3082_16) (Genus species); c00017_HRGM_G.. (original name was: HRGM_Genome_3082_17) (Genus species); c00018_HRGM_G.. (original name was: HRGM_Genome_3082_18) (Genus species); c00019_HRGM_G.. (original name was: HRGM_Genome_3082_19) (Genus species); c00020_HRGM_G.. (original name was: HRGM_Genome_3082_20) (Genus species); c00021_HRGM_G.. (original name was: HRGM_Genome_3082_21) (Genus species); c00022_HRGM_G.. (original name was: HRGM_Genome_3082_22) (Genus species); c00023_HRGM_G.. (original name was: HRGM_Genome_3082_23) (Genus species); c00024_HRGM_G.. (original name was: HRGM_Genome_3082_24) (Genus species); c00025_HRGM_G.. (original name was: HRGM_Genome_3082_25) (Genus species); c00026_HRGM_G.. (original name was: HRGM_Genome_3082_26) (Genus species); c00027_HRGM_G.. (original name was: HRGM_Genome_3082_27) (Genus species); c00028_HRGM_G.. (original name was: HRGM_Genome_3082_28) (Genus species); c00029_HRGM_G.. (original name was: HRGM_Genome_3082_29) (Genus species); c00031_HRGM_G.. (original name was: HRGM_Genome_3082_31) (Genus species); c00032_HRGM_G.. (original name was: HRGM_Genome_3082_32) (Genus species); c00033_HRGM_G.. (original name was: HRGM_Genome_3082_33) (Genus species); c00034_HRGM_G.. (original name was: HRGM_Genome_3082_34) (Genus species); c00035_HRGM_G.. (original name was: HRGM_Genome_3082_35) (Genus species); c00036_HRGM_G.. (original name was: HRGM_Genome_3082_36) (Genus species); c00037_HRGM_G.. (original name was: HRGM_Genome_3082_37) (Genus species); c00038_HRGM_G.. (original name was: HRGM_Genome_3082_38) (Genus species); c00039_HRGM_G.. (original name was: HRGM_Genome_3082_39) (Genus species); c00040_HRGM_G.. (original name was: HRGM_Genome_3082_40) (Genus species); c00041_HRGM_G.. (original name was: HRGM_Genome_3082_41) (Genus species); c00042_HRGM_G.. (original name was: HRGM_Genome_3082_42) (Genus species); c00043_HRGM_G.. (original name was: HRGM_Genome_3082_43) (Genus species); c00044_HRGM_G.. (original name was: HRGM_Genome_3082_44) (Genus species); c00045_HRGM_G.. (original name was: HRGM_Genome_3082_45) (Genus species); c00046_HRGM_G.. (original name was: HRGM_Genome_3082_46) (Genus species); c00047_HRGM_G.. (original name was: HRGM_Genome_3082_47) (Genus species); c00048_HRGM_G.. (original name was: HRGM_Genome_3082_48) (Genus species); c00049_HRGM_G.. (original name was: HRGM_Genome_3082_49) (Genus species); c00050_HRGM_G.. (original name was: HRGM_Genome_3082_50) (Genus species); c00051_HRGM_G.. (original name was: HRGM_Genome_3082_51) (Genus species); c00052_HRGM_G.. (original name was: HRGM_Genome_3082_52) (Genus species); c00053_HRGM_G.. (original name was: HRGM_Genome_3082_53) (Genus species); c00054_HRGM_G.. (original name was: HRGM_Genome_3082_54) (Genus species)

Compact view

c00001_HRGM_G.. - Region 1 - bacteriocin

Download region GenBank file

Location: 78,975 - 89,313 nt. (total: 10,339 nt) Show pHMM detection rules used

bacteriocin: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03603 or TIGR03604 or TIGR03651 or TIGR03678 or TIGR03693 or TIGR03798 or TIGR03601 or TIGR03602 or TIGR03795 or TIGR03793 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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ClusterBlast

KnownClusterBlast

SubClusterBlast

Similar gene clusters

No significant ClusterBlast hits found.

Similar known gene clusters

No matches found.

Similar subclusters

No matches found.

c00004_HRGM_G.. - Region 1 - bacteriocin

Download region GenBank file

Location: 78,388 - 88,723 nt. (total: 10,336 nt) Show pHMM detection rules used

bacteriocin: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03603 or TIGR03604 or TIGR03651 or TIGR03678 or TIGR03693 or TIGR03798 or TIGR03601 or TIGR03602 or TIGR03795 or TIGR03793 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

ClusterBlast

KnownClusterBlast

SubClusterBlast

Similar gene clusters

No significant ClusterBlast hits found.

Similar known gene clusters

No matches found.

Similar subclusters

No matches found.

c00030_HRGM_G.. - Region 1 - bacteriocin

Download region GenBank file

Location: 1 - 5,942 nt. (total: 5,942 nt) Show pHMM detection rules used

Region on contig edge.

bacteriocin: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03603 or TIGR03604 or TIGR03651 or TIGR03678 or TIGR03693 or TIGR03798 or TIGR03601 or TIGR03602 or TIGR03795 or TIGR03793 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

ClusterBlast

KnownClusterBlast

SubClusterBlast

Similar gene clusters

Similar known gene clusters

No matches found.

Similar subclusters

No matches found.