HRGM_Genome_1561 - 1 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

c00125_HRGM_G.. (original name was: HRGM_Genome_1561_125) (Genus species)

Region	Type	From	To	Most similar known cluster		Similarity
Region 125.1	lanthipeptide	1	9,832

Region	Type	From	To	Most similar known cluster	Similarity
Region 125.1	lanthipeptide	1	9,832

No secondary metabolite regions were found in these records:: c00001_HRGM_G.. (original name was: HRGM_Genome_1561_1) (Genus species); c00002_HRGM_G.. (original name was: HRGM_Genome_1561_2) (Genus species); c00003_HRGM_G.. (original name was: HRGM_Genome_1561_3) (Genus species); c00004_HRGM_G.. (original name was: HRGM_Genome_1561_4) (Genus species); c00005_HRGM_G.. (original name was: HRGM_Genome_1561_5) (Genus species); c00006_HRGM_G.. (original name was: HRGM_Genome_1561_6) (Genus species); c00007_HRGM_G.. (original name was: HRGM_Genome_1561_7) (Genus species); c00008_HRGM_G.. (original name was: HRGM_Genome_1561_8) (Genus species); c00009_HRGM_G.. (original name was: HRGM_Genome_1561_9) (Genus species); c00010_HRGM_G.. (original name was: HRGM_Genome_1561_10) (Genus species); c00011_HRGM_G.. (original name was: HRGM_Genome_1561_11) (Genus species); c00012_HRGM_G.. (original name was: HRGM_Genome_1561_12) (Genus species); c00013_HRGM_G.. (original name was: HRGM_Genome_1561_13) (Genus species); c00014_HRGM_G.. (original name was: HRGM_Genome_1561_14) (Genus species); c00015_HRGM_G.. (original name was: HRGM_Genome_1561_15) (Genus species); c00016_HRGM_G.. (original name was: HRGM_Genome_1561_16) (Genus species); c00017_HRGM_G.. (original name was: HRGM_Genome_1561_17) (Genus species); c00018_HRGM_G.. (original name was: HRGM_Genome_1561_18) (Genus species); c00019_HRGM_G.. (original name was: HRGM_Genome_1561_19) (Genus species); c00020_HRGM_G.. (original name was: HRGM_Genome_1561_20) (Genus species); c00021_HRGM_G.. (original name was: HRGM_Genome_1561_21) (Genus species); c00022_HRGM_G.. (original name was: HRGM_Genome_1561_22) (Genus species); c00023_HRGM_G.. (original name was: HRGM_Genome_1561_23) (Genus species); c00024_HRGM_G.. (original name was: HRGM_Genome_1561_24) (Genus species); c00025_HRGM_G.. (original name was: HRGM_Genome_1561_25) (Genus species); c00026_HRGM_G.. (original name was: HRGM_Genome_1561_26) (Genus species); c00027_HRGM_G.. (original name was: HRGM_Genome_1561_27) (Genus species); c00028_HRGM_G.. (original name was: HRGM_Genome_1561_28) (Genus species); c00029_HRGM_G.. (original name was: HRGM_Genome_1561_29) (Genus species); c00030_HRGM_G.. (original name was: HRGM_Genome_1561_30) (Genus species); c00031_HRGM_G.. (original name was: HRGM_Genome_1561_31) (Genus species); c00032_HRGM_G.. (original name was: HRGM_Genome_1561_32) (Genus species); c00033_HRGM_G.. (original name was: HRGM_Genome_1561_33) (Genus species); c00034_HRGM_G.. (original name was: HRGM_Genome_1561_34) (Genus species); c00035_HRGM_G.. (original name was: HRGM_Genome_1561_35) (Genus species); c00036_HRGM_G.. (original name was: HRGM_Genome_1561_36) (Genus species); c00037_HRGM_G.. (original name was: HRGM_Genome_1561_37) (Genus species); c00038_HRGM_G.. (original name was: HRGM_Genome_1561_38) (Genus species); c00039_HRGM_G.. (original name was: HRGM_Genome_1561_39) (Genus species); c00040_HRGM_G.. (original name was: HRGM_Genome_1561_40) (Genus species); c00041_HRGM_G.. (original name was: HRGM_Genome_1561_41) (Genus species); c00042_HRGM_G.. (original name was: HRGM_Genome_1561_42) (Genus species); c00043_HRGM_G.. (original name was: HRGM_Genome_1561_43) (Genus species); c00044_HRGM_G.. (original name was: HRGM_Genome_1561_44) (Genus species); c00045_HRGM_G.. (original name was: HRGM_Genome_1561_45) (Genus species); c00046_HRGM_G.. (original name was: HRGM_Genome_1561_46) (Genus species); c00047_HRGM_G.. (original name was: HRGM_Genome_1561_47) (Genus species); c00048_HRGM_G.. (original name was: HRGM_Genome_1561_48) (Genus species); c00049_HRGM_G.. (original name was: HRGM_Genome_1561_49) (Genus species); c00050_HRGM_G.. (original name was: HRGM_Genome_1561_50) (Genus species); c00051_HRGM_G.. (original name was: HRGM_Genome_1561_51) (Genus species); c00052_HRGM_G.. (original name was: HRGM_Genome_1561_52) (Genus species); c00053_HRGM_G.. (original name was: HRGM_Genome_1561_53) (Genus species); c00054_HRGM_G.. (original name was: HRGM_Genome_1561_54) (Genus species); c00055_HRGM_G.. (original name was: HRGM_Genome_1561_55) (Genus species); c00056_HRGM_G.. (original name was: HRGM_Genome_1561_56) (Genus species); c00057_HRGM_G.. (original name was: HRGM_Genome_1561_57) (Genus species); c00058_HRGM_G.. (original name was: HRGM_Genome_1561_58) (Genus species); c00059_HRGM_G.. (original name was: HRGM_Genome_1561_59) (Genus species); c00060_HRGM_G.. (original name was: HRGM_Genome_1561_60) (Genus species); c00061_HRGM_G.. (original name was: HRGM_Genome_1561_61) (Genus species); c00062_HRGM_G.. (original name was: HRGM_Genome_1561_62) (Genus species); c00063_HRGM_G.. (original name was: HRGM_Genome_1561_63) (Genus species); c00064_HRGM_G.. (original name was: HRGM_Genome_1561_64) (Genus species); c00065_HRGM_G.. (original name was: HRGM_Genome_1561_65) (Genus species); c00066_HRGM_G.. (original name was: HRGM_Genome_1561_66) (Genus species); c00067_HRGM_G.. (original name was: HRGM_Genome_1561_67) (Genus species); c00068_HRGM_G.. (original name was: HRGM_Genome_1561_68) (Genus species); c00069_HRGM_G.. (original name was: HRGM_Genome_1561_69) (Genus species); c00070_HRGM_G.. (original name was: HRGM_Genome_1561_70) (Genus species); c00071_HRGM_G.. (original name was: HRGM_Genome_1561_71) (Genus species); c00072_HRGM_G.. (original name was: HRGM_Genome_1561_72) (Genus species); c00073_HRGM_G.. (original name was: HRGM_Genome_1561_73) (Genus species); c00074_HRGM_G.. (original name was: HRGM_Genome_1561_74) (Genus species); c00075_HRGM_G.. (original name was: HRGM_Genome_1561_75) (Genus species); c00076_HRGM_G.. (original name was: HRGM_Genome_1561_76) (Genus species); c00077_HRGM_G.. (original name was: HRGM_Genome_1561_77) (Genus species); c00078_HRGM_G.. (original name was: HRGM_Genome_1561_78) (Genus species); c00079_HRGM_G.. (original name was: HRGM_Genome_1561_79) (Genus species); c00080_HRGM_G.. (original name was: HRGM_Genome_1561_80) (Genus species); c00081_HRGM_G.. (original name was: HRGM_Genome_1561_81) (Genus species); c00082_HRGM_G.. (original name was: HRGM_Genome_1561_82) (Genus species); c00083_HRGM_G.. (original name was: HRGM_Genome_1561_83) (Genus species); c00084_HRGM_G.. (original name was: HRGM_Genome_1561_84) (Genus species); c00085_HRGM_G.. (original name was: HRGM_Genome_1561_85) (Genus species); c00086_HRGM_G.. (original name was: HRGM_Genome_1561_86) (Genus species); c00087_HRGM_G.. (original name was: HRGM_Genome_1561_87) (Genus species); c00088_HRGM_G.. (original name was: HRGM_Genome_1561_88) (Genus species); c00089_HRGM_G.. (original name was: HRGM_Genome_1561_89) (Genus species); c00090_HRGM_G.. (original name was: HRGM_Genome_1561_90) (Genus species); c00091_HRGM_G.. (original name was: HRGM_Genome_1561_91) (Genus species); c00092_HRGM_G.. (original name was: HRGM_Genome_1561_92) (Genus species); c00093_HRGM_G.. (original name was: HRGM_Genome_1561_93) (Genus species); c00094_HRGM_G.. (original name was: HRGM_Genome_1561_94) (Genus species); c00095_HRGM_G.. (original name was: HRGM_Genome_1561_95) (Genus species); c00096_HRGM_G.. (original name was: HRGM_Genome_1561_96) (Genus species); c00097_HRGM_G.. (original name was: HRGM_Genome_1561_97) (Genus species); c00098_HRGM_G.. (original name was: HRGM_Genome_1561_98) (Genus species); c00099_HRGM_G.. (original name was: HRGM_Genome_1561_99) (Genus species); c00100_HRGM_G.. (original name was: HRGM_Genome_1561_100) (Genus species); c00101_HRGM_G.. (original name was: HRGM_Genome_1561_101) (Genus species); c00102_HRGM_G.. (original name was: HRGM_Genome_1561_102) (Genus species); c00103_HRGM_G.. (original name was: HRGM_Genome_1561_103) (Genus species); c00104_HRGM_G.. (original name was: HRGM_Genome_1561_104) (Genus species); c00105_HRGM_G.. (original name was: HRGM_Genome_1561_105) (Genus species); c00106_HRGM_G.. (original name was: HRGM_Genome_1561_106) (Genus species); c00107_HRGM_G.. (original name was: HRGM_Genome_1561_107) (Genus species); c00108_HRGM_G.. (original name was: HRGM_Genome_1561_108) (Genus species); c00109_HRGM_G.. (original name was: HRGM_Genome_1561_109) (Genus species); c00110_HRGM_G.. (original name was: HRGM_Genome_1561_110) (Genus species); c00111_HRGM_G.. (original name was: HRGM_Genome_1561_111) (Genus species); c00112_HRGM_G.. (original name was: HRGM_Genome_1561_112) (Genus species); c00113_HRGM_G.. (original name was: HRGM_Genome_1561_113) (Genus species); c00114_HRGM_G.. (original name was: HRGM_Genome_1561_114) (Genus species); c00115_HRGM_G.. (original name was: HRGM_Genome_1561_115) (Genus species); c00116_HRGM_G.. (original name was: HRGM_Genome_1561_116) (Genus species); c00117_HRGM_G.. (original name was: HRGM_Genome_1561_117) (Genus species); c00118_HRGM_G.. (original name was: HRGM_Genome_1561_118) (Genus species); c00119_HRGM_G.. (original name was: HRGM_Genome_1561_119) (Genus species); c00120_HRGM_G.. (original name was: HRGM_Genome_1561_120) (Genus species); c00121_HRGM_G.. (original name was: HRGM_Genome_1561_121) (Genus species); c00122_HRGM_G.. (original name was: HRGM_Genome_1561_122) (Genus species); c00123_HRGM_G.. (original name was: HRGM_Genome_1561_123) (Genus species); c00124_HRGM_G.. (original name was: HRGM_Genome_1561_124) (Genus species); c00126_HRGM_G.. (original name was: HRGM_Genome_1561_126) (Genus species); c00127_HRGM_G.. (original name was: HRGM_Genome_1561_127) (Genus species); c00128_HRGM_G.. (original name was: HRGM_Genome_1561_128) (Genus species); c00129_HRGM_G.. (original name was: HRGM_Genome_1561_129) (Genus species); c00130_HRGM_G.. (original name was: HRGM_Genome_1561_130) (Genus species); c00131_HRGM_G.. (original name was: HRGM_Genome_1561_131) (Genus species); c00132_HRGM_G.. (original name was: HRGM_Genome_1561_132) (Genus species); c00133_HRGM_G.. (original name was: HRGM_Genome_1561_133) (Genus species); c00134_HRGM_G.. (original name was: HRGM_Genome_1561_134) (Genus species); c00135_HRGM_G.. (original name was: HRGM_Genome_1561_135) (Genus species); c00136_HRGM_G.. (original name was: HRGM_Genome_1561_136) (Genus species); c00137_HRGM_G.. (original name was: HRGM_Genome_1561_137) (Genus species); c00138_HRGM_G.. (original name was: HRGM_Genome_1561_138) (Genus species); c00139_HRGM_G.. (original name was: HRGM_Genome_1561_139) (Genus species); c00140_HRGM_G.. (original name was: HRGM_Genome_1561_140) (Genus species); c00141_HRGM_G.. (original name was: HRGM_Genome_1561_141) (Genus species); c00142_HRGM_G.. (original name was: HRGM_Genome_1561_142) (Genus species); c00143_HRGM_G.. (original name was: HRGM_Genome_1561_143) (Genus species); c00144_HRGM_G.. (original name was: HRGM_Genome_1561_144) (Genus species); c00145_HRGM_G.. (original name was: HRGM_Genome_1561_145) (Genus species); c00146_HRGM_G.. (original name was: HRGM_Genome_1561_146) (Genus species); c00147_HRGM_G.. (original name was: HRGM_Genome_1561_147) (Genus species); c00148_HRGM_G.. (original name was: HRGM_Genome_1561_148) (Genus species); c00149_HRGM_G.. (original name was: HRGM_Genome_1561_149) (Genus species); c00150_HRGM_G.. (original name was: HRGM_Genome_1561_150) (Genus species); c00151_HRGM_G.. (original name was: HRGM_Genome_1561_151) (Genus species); c00152_HRGM_G.. (original name was: HRGM_Genome_1561_152) (Genus species); c00153_HRGM_G.. (original name was: HRGM_Genome_1561_153) (Genus species); c00154_HRGM_G.. (original name was: HRGM_Genome_1561_154) (Genus species); c00155_HRGM_G.. (original name was: HRGM_Genome_1561_155) (Genus species); c00156_HRGM_G.. (original name was: HRGM_Genome_1561_156) (Genus species); c00157_HRGM_G.. (original name was: HRGM_Genome_1561_157) (Genus species); c00158_HRGM_G.. (original name was: HRGM_Genome_1561_158) (Genus species); c00159_HRGM_G.. (original name was: HRGM_Genome_1561_159) (Genus species); c00160_HRGM_G.. (original name was: HRGM_Genome_1561_160) (Genus species); c00161_HRGM_G.. (original name was: HRGM_Genome_1561_161) (Genus species); c00162_HRGM_G.. (original name was: HRGM_Genome_1561_162) (Genus species); c00163_HRGM_G.. (original name was: HRGM_Genome_1561_163) (Genus species); c00164_HRGM_G.. (original name was: HRGM_Genome_1561_164) (Genus species); c00165_HRGM_G.. (original name was: HRGM_Genome_1561_165) (Genus species); c00166_HRGM_G.. (original name was: HRGM_Genome_1561_166) (Genus species); c00167_HRGM_G.. (original name was: HRGM_Genome_1561_167) (Genus species); c00168_HRGM_G.. (original name was: HRGM_Genome_1561_168) (Genus species); c00169_HRGM_G.. (original name was: HRGM_Genome_1561_169) (Genus species); c00170_HRGM_G.. (original name was: HRGM_Genome_1561_170) (Genus species); c00171_HRGM_G.. (original name was: HRGM_Genome_1561_171) (Genus species); c00172_HRGM_G.. (original name was: HRGM_Genome_1561_172) (Genus species); c00173_HRGM_G.. (original name was: HRGM_Genome_1561_173) (Genus species); c00174_HRGM_G.. (original name was: HRGM_Genome_1561_174) (Genus species); c00175_HRGM_G.. (original name was: HRGM_Genome_1561_175) (Genus species); c00176_HRGM_G.. (original name was: HRGM_Genome_1561_176) (Genus species); c00177_HRGM_G.. (original name was: HRGM_Genome_1561_177) (Genus species); c00178_HRGM_G.. (original name was: HRGM_Genome_1561_178) (Genus species); c00179_HRGM_G.. (original name was: HRGM_Genome_1561_179) (Genus species); c00180_HRGM_G.. (original name was: HRGM_Genome_1561_180) (Genus species); c00181_HRGM_G.. (original name was: HRGM_Genome_1561_181) (Genus species); c00182_HRGM_G.. (original name was: HRGM_Genome_1561_182) (Genus species); c00183_HRGM_G.. (original name was: HRGM_Genome_1561_183) (Genus species); c00184_HRGM_G.. (original name was: HRGM_Genome_1561_184) (Genus species); c00185_HRGM_G.. (original name was: HRGM_Genome_1561_185) (Genus species); c00186_HRGM_G.. (original name was: HRGM_Genome_1561_186) (Genus species); c00187_HRGM_G.. (original name was: HRGM_Genome_1561_187) (Genus species); c00188_HRGM_G.. (original name was: HRGM_Genome_1561_188) (Genus species); c00189_HRGM_G.. (original name was: HRGM_Genome_1561_189) (Genus species); c00190_HRGM_G.. (original name was: HRGM_Genome_1561_190) (Genus species); c00191_HRGM_G.. (original name was: HRGM_Genome_1561_191) (Genus species); c00192_HRGM_G.. (original name was: HRGM_Genome_1561_192) (Genus species); c00193_HRGM_G.. (original name was: HRGM_Genome_1561_193) (Genus species); c00194_HRGM_G.. (original name was: HRGM_Genome_1561_194) (Genus species); c00195_HRGM_G.. (original name was: HRGM_Genome_1561_195) (Genus species); c00196_HRGM_G.. (original name was: HRGM_Genome_1561_196) (Genus species); c00197_HRGM_G.. (original name was: HRGM_Genome_1561_197) (Genus species); c00198_HRGM_G.. (original name was: HRGM_Genome_1561_198) (Genus species); c00199_HRGM_G.. (original name was: HRGM_Genome_1561_199) (Genus species); c00200_HRGM_G.. (original name was: HRGM_Genome_1561_200) (Genus species); c00201_HRGM_G.. (original name was: HRGM_Genome_1561_201) (Genus species); c00202_HRGM_G.. (original name was: HRGM_Genome_1561_202) (Genus species); c00203_HRGM_G.. (original name was: HRGM_Genome_1561_203) (Genus species); c00204_HRGM_G.. (original name was: HRGM_Genome_1561_204) (Genus species); c00205_HRGM_G.. (original name was: HRGM_Genome_1561_205) (Genus species); c00206_HRGM_G.. (original name was: HRGM_Genome_1561_206) (Genus species); c00207_HRGM_G.. (original name was: HRGM_Genome_1561_207) (Genus species); c00208_HRGM_G.. (original name was: HRGM_Genome_1561_208) (Genus species); c00209_HRGM_G.. (original name was: HRGM_Genome_1561_209) (Genus species); c00210_HRGM_G.. (original name was: HRGM_Genome_1561_210) (Genus species); c00211_HRGM_G.. (original name was: HRGM_Genome_1561_211) (Genus species); c00212_HRGM_G.. (original name was: HRGM_Genome_1561_212) (Genus species); c00213_HRGM_G.. (original name was: HRGM_Genome_1561_213) (Genus species); c00214_HRGM_G.. (original name was: HRGM_Genome_1561_214) (Genus species); c00215_HRGM_G.. (original name was: HRGM_Genome_1561_215) (Genus species); c00216_HRGM_G.. (original name was: HRGM_Genome_1561_216) (Genus species); c00217_HRGM_G.. (original name was: HRGM_Genome_1561_217) (Genus species); c00218_HRGM_G.. (original name was: HRGM_Genome_1561_218) (Genus species); c00219_HRGM_G.. (original name was: HRGM_Genome_1561_219) (Genus species); c00220_HRGM_G.. (original name was: HRGM_Genome_1561_220) (Genus species); c00221_HRGM_G.. (original name was: HRGM_Genome_1561_221) (Genus species); c00222_HRGM_G.. (original name was: HRGM_Genome_1561_222) (Genus species); c00223_HRGM_G.. (original name was: HRGM_Genome_1561_223) (Genus species); c00224_HRGM_G.. (original name was: HRGM_Genome_1561_224) (Genus species); c00225_HRGM_G.. (original name was: HRGM_Genome_1561_225) (Genus species); c00226_HRGM_G.. (original name was: HRGM_Genome_1561_226) (Genus species); c00227_HRGM_G.. (original name was: HRGM_Genome_1561_227) (Genus species); c00228_HRGM_G.. (original name was: HRGM_Genome_1561_228) (Genus species); c00229_HRGM_G.. (original name was: HRGM_Genome_1561_229) (Genus species); c00230_HRGM_G.. (original name was: HRGM_Genome_1561_230) (Genus species)

Compact view

c00125_HRGM_G.. - Region 1 - lanthipeptide

Download region GenBank file

Location: 1 - 9,832 nt. (total: 9,832 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide: ((LANC_like and (Lant_dehydr_N or Lant_dehydr_C) or cds(LANC_like and (Pkinase or DUF4135))) and not (YcaO or TIGR03882))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Lanthipeptides

ClusterBlast

KnownClusterBlast

SubClusterBlast

Lanthipeptide predictions

Lanthipeptide(s) for HRGM_Genome_1561_CDS_02202 - Putative Class II

HRGM_Genome_1561_CDS_02201 leader / core peptide: MTEEFIGCIEEELKEIELFYEENGVEVEAYTLHNG - DhaFFDhaICC
allorf_5111_5182 leader / core peptide: MNICNYRIKRILMGMSVFA - CIDhaD
allorf_9557_9748 leader / core peptide: MQGQAIMPYPAQRRTVRAA - CLDhbNNPILFYALQHMYQPADDhaCYVLDhaGLPDhaLIRLHLEDhaIDhaERLR

Legend:

Dha: Didehydroalanine
Dhb: Didehydrobutyrine

Similar gene clusters

Similar known gene clusters

No matches found.

Similar subclusters

No matches found.

Lanthipeptides

Core peptide predictions

HRGM_Genome_1561_CDS_02201 - Class II

Cleavage pHMM score: -6.60

RODEO score: 0

Monoisotopic mass: 769.3 Da

Molecular weight: 769.9 Da

Number of bridges: 2

allorf_5111_5182 - Class II

Cleavage pHMM score: -6.80

RODEO score: 0

Monoisotopic mass: 418.2 Da

Molecular weight: 418.5 Da

Number of bridges: 1

allorf_9557_9748 - Class II

Cleavage pHMM score: -4.60

RODEO score: 0

Monoisotopic mass: 4965.6 Da

Molecular weight: 4968.8 Da

Number of bridges: 2

Alternative weights: (assuming N unmodified Ser/Thr residues); 4986.8 Da N = 1; 5004.8 Da N = 2; 5022.8 Da N = 3; 5040.8 Da N = 4