0. redundant_CDS/
- all_redundant_CDS.faa.gz : All redundant CDS sequences (amino acid, faa)
- all_redundant_CDS.fna.gz : All redundant CDS sequences (nucleotide, fna)
1. HRGMv2_Unique_Proteins/
- HRGMv2_Unique_Proteins_rep_seq.faa.gz : Representative sequences for unique CDS sequences (amino acid, faa)
- HRGMv2_Unique_Proteins.cluster_info.updated.tsv.gz : Cluster info for Unique proteins
- HRGMv2_Unique_Proteins.taxonomic_map.tsv.gz : Taxonomy info for Unique proteins
2~6. HRGMv2_{identity - 100, 95, 90, 70, 50}_Proteins/
- HRGMv2_{identity}_Proteins_rep_seq.faa.gz : Representative sequences {identity}% protein families (amino acid, faa)
- HRGMv2_{identity}_Proteins_cluster.tsv.gz : Cluster info for {identity}% protein families (representative sequences - member)
- HRGMv2_{identity}_Proteins.cluster_info.updated.tsv.gz : Cluster info for {identity}% protein families
- HRGMv2_{identity}_Proteins.taxonomic_map.tsv.gz : Taxonomy info for {identity}% protein families
- emapper_results : eggNOG-mapper results for {identity}% proteins families
++ deepgoplus_results : deepgoplus results for 90% protein families (after filtering)
Present directory - data/protein_catalog/0.HRGMv2_Proteins
| Name | Last modified | Size | |
|---|---|---|---|
| Parent Directory | - | - | |
| 0.redundant_CDS | 2025-02-17 03:51:48 | - | |
| 1.HRGMv2_Unique_Proteins | 2025-02-17 03:52:56 | - | |
| 2.HRGMv2_100_Proteins | 2025-02-17 03:55:01 | - | |
| 3.HRGMv2_95_Proteins | 2025-02-17 03:58:06 | - | |
| 4.HRGMv2_90_Proteins | 2025-02-17 03:52:22 | - | |
| 5.HRGMv2_70_Proteins | 2025-02-17 03:58:54 | - | |
| 6.HRGMv2_50_Proteins | 2025-02-17 03:59:16 | - | |
| README.txt | 2025-04-23 20:17:04 | 1 KB |