- rgi_results/ : RGI results for 4,824 HRGMv2 species (prediction to pangenome) - emapper_results/ : eggNOG-mapper results for 4,824 HRGMv2 species (prediction to pangenome) - for bulk download, rgi_result.tar.gz and emapper_results.tar.gz are available. * Each file is structured in a 4-level hierarchy structure to make folder navigation easier. For example, rgi_results/ or emapper_results/ ← Root └── HRGMv2_20XX/ ← Level 1 (group of 100s) └── HRGMv2_204X/ ← Level 2 (group of 10s) ├── HRGMv2_2040/ ← Level 3 (HRGM2 species) ├── HRGMv2_0434.emapper.annotations ← Level 4 (actual files) └── ... ** Pangenome can be downloaded at the genome_catalog/HRGMv2_Genomes/HRGMv2_Pangenomes/ **