GEMs/
: Genome-scale metabolic models (GEMs) reconstructed for all non-redundant genomes in HRGMv2.
⚠️ GEM reconstruction failed for the following four genomes due to unknown reasons:
(GENOME087726 in HRGMv2_0709, GENOME205746 in HRGMv2_3350, GENOME226109 in HRGMv2_3524, GENOME227506 in HRGMv2_3550)
- GEMs_results/
: Directory containing GEM models (in XML format) for each successfully processed non-redundant genome
- For bulk download:
1. GEMs.tar.gz – Compressed archive of the GEMs/ directory
2. GEM_download_link_info.tsv – List of direct download URLs for each individual GEM file